---
description: Compare Paychex Flex vs Square Payroll to learn about each of the product's price, benefits and disadvantages. Choose the best software for your business in Australia.
image: https://gdm-localsites-assets-gfprod.imgix.net/images/capterra/og_logo-e5a8c001ed0bd1bb922639230fcea71a.png?auto=format%2Cenhance%2Ccompress
title: Paychex Flex vs Square Payroll Comparison - Capterra Australia 2026
---

Breadcrumb: [Home](/) > [Direct Deposit Payroll Software](/directory/32598/direct-deposit-payroll/software) > [Paychex Flex \<span\>vs\</span\> Square Payroll](https://www.capterra.com.au/compare/119841/170266/paychex-flex/vs/square-payroll)

# Compare Paychex Flex vs Square Payroll

Canonical: https://www.capterra.com.au/compare/119841/170266/paychex-flex/vs/square-payroll

> Detailed comparison between Paychex Flex and Square Payroll. Check ratings, reviews, pricing, and features to make the best decision for your business.

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## At a Glance

| Metric | Paychex Flex | Square Payroll |
| **Overall rating** | 4.2/5 | 4.7/5 |
| **Total Reviews** | 1786 | 620 |
| **Starting Price** | - | USD 35.00 |
| **Free Trial** | No | Yes |
| **Free Version** | No | No |
| **Deployment** | Cloud, SaaS, Web-based, Mac (Desktop), Windows (Desktop), Android (Mobile), iPhone (Mobile), iPad (Mobile) | Cloud, SaaS, Web-based, Android (Mobile), iPhone (Mobile), iPad (Mobile) |
| **Support** | Email/Help Desk, Phone Support, 24/7 (Live rep), Chat | Email/Help Desk, FAQs/Forum, Knowledge Base, Phone Support, Chat |
| **Training** | In Person, Live Online, Webinars, Documentation | - |

## Best for

### Paychex Flex

Business Owners, Human Resources Professionals, CRHOs, CEOs, CFOs, of all business sizes use Paychex for HR, payroll, and benefits solutions to streamline and automate HR administrative tasks.

### Square Payroll

Small to medium size business employers with up to 100 employees.&#10;Salaried or hourly employees.&#10;Pay W-2 employees, 1099 contractors, or both.

## Key features

### Paychex Flex

- API
- Accounting
- Benefits Dashboard
- Benefits Management
- Customizable Reports
- Dashboard
- Direct Deposit
- Employee Portal
- Employee Self Service
- For Accountants
- Real-Time Reporting
- Reminders
- Reporting/Analytics
- Tax Calculation
- Tax Filing
- Time Tracking
- Timesheet Management
- W-2 Preparation
- Wage Garnishment
- Web-based Deployment

### Square Payroll

- API
- Accounting
- Benefits Dashboard
- Benefits Management
- Customizable Reports
- Dashboard
- Direct Deposit
- Employee Portal
- Employee Self Service
- For Accountants
- Real-Time Reporting
- Reminders
- Reporting/Analytics
- Tax Calculation
- Tax Filing
- Time Tracking
- Timesheet Management
- W-2 Preparation
- Wage Garnishment
- Web-based Deployment

## Links

- [View Paychex Flex Profile](https://www.capterra.com.au/software/119841/paychex-flex)
- [View Square Payroll Profile](https://www.capterra.com.au/software/170266/square-payroll)
- [View Original Comparison](https://www.capterra.com.au/compare/119841/170266/paychex-flex/vs/square-payroll)

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